encode-toolkit
用于完整ENCODE项目基因组数据和分析工具集的MCP服务器与Claude插件——搜索、下载、追踪和分析功能基因组学实验。
MCP server and Claude Code plugin for the ENCODE Project: search, download and analyze ChIP-seq, ATAC-seq, RNA-seq, WGBS, Hi-C and CUT&RUN data with 20 tools, 47 skills and 7 Nextflow pipelines
怎么安装
npx -y encode-toolkit git clone https://github.com/ammawla/encode-toolkit ~/.claude/skills/encode-toolkit 简介
ENCODE Toolkit — Genomics Research Infrastructure for Claude Search ENCODE, cross-reference 14 databases, run 7 analysis pipelines, and generate publication-ready methods — all from natural language in Claude Code. Start from ENCODE but go everywhere: discover histone peaks, cross-reference with GWAS variants, check ClinVar pathogenicity, pull GTEx expression, analyze TF binding motifs from JASPAR, run pipelines, and generate publication-ready methods with full provenance — in one conversation. --- Citation Notes If you use **ENCODE-Toolkit**, please cite: Alex M. Mawla. (2026). *ENCODE-Toolki…
推荐参考
信息
- 协议
- AGPL-3.0
- 语言
- Python
- GitHub 星标
- 20
- 月下载
- 498
- 最近更新
- 2026-09-21
- 创建于
- 2026-03-08
基础安全检查
- 检查结果
- 无
- 收录来源
- curated:punkpeye/awesome-mcp-servers
- 主题标签
- ai, ai-agents, ai-bio, bioinformatics, bioinformatics-tool, claude, claude-code, claude-code-mcp, claude-code-plugin, claude-code-skills, claude-mcp, claude-plugin, claude-skills, encode, mcp-server
同类推荐
ruflo
ruvnet/claude-flow
🌊 原始的代理元框架。部署智能多智能体群体，协调自主工作流，构建对话式AI系统。具备自适应记忆、自学习智能、RAG集成，并原生集成Claude Code / Codex / Hermes等。